Data

MYCORRHIZAL DIVERSITY AND EFFECTS ON BRITTLEBUSH IN A SONORAN DESERT URBAN ECOSYSTEM

Identifier: 385_1

Publication date: 2006

Author(s):
Robert Bills; Jean Stutz;

Abstract:

In this study, the functioning of AM fungi in brittlebush (Encelia farinosa A. Gray ex Torr.) grown at an urban site and a desert site are compared. E. farinosa is a native, desert shrub commonly found in the Sonoran Desert surrounding Phoenix and used as an ornamental shrub in residential and commercial sites in the Phoenix metropolitan area. Because this shrub is common in urban and desert areas, it can be used to compare AM fungal colonization levels between these areas.

In addition, the impact of AM fungi on E. farinosa growth and reproductive output was studied by attempting to manipulate the levels of AM fungal colonization using the fungicide methyl-1-(butyl-carbamoyl)-2-benzimidazole (benomyl). This fungicide has been shown to suppress colonization of roots by AM fungi with little phytotoxicity or effect on soil nutrients (Fitter and Nichols 1988; Hartnett and Wilson 2002). Hartnett and Wilson (2002) stated that the best method available to assess the roles and functions of AM fungi in natural communities is through the use of fungicides such as benomyl. Treatment with benomyl should allow for comparisons between plants that have typical levels of mycorrhizal colonization and those with lower, suppressed levels of colonization.

The impact of AM fungi on the productivity of brittlebush plants was examined at an urban and desert site. Fungal colonization was greater at the desert site but biomass and reproductive output was higher at the urban site. When mycorrhizal colonization was suppressed, plants had greater vegetative growth, but there was no effect on reproductive output. .



Keywords:


Temporal Coverage:

2004-01-01 - 2005-12-31

Geographic Coverage:

Geographic Description:Phoenix metropolitan area in Arizona, USA
Bounding Coordinates:
Longitude:-111.93995 to -111.61515
Latitude:33.4784 to 33.46495

Contact:

Information Manager, 
Global Institute of Sustainability,Arizona State University,POB 875402,Tempe
 caplter.data@asu.edu

Methods used in producing this dataset:


Site Choice and Sample Collection

Two sites were selected for this study, an urban site, located at the Desert Botanical Garden in Phoenix, Arizona, and a desert site located at Usery Mountain Park (desert site), Mesa, Arizona. The urban site is located in the Lower Colorado River Valley Subdivision of the Sonoran Desert, the driest and most arid region in the Sonoran Desert with creosote bush (Larrea tridentata (Sess and Moc. ex DC.) Coville) and white bursage (Ambrosia dumosa (A. Gray) W.W. Payne) plant communities among the most abundant and important in this region. The desert site is located in the Arizona Upland Subdivision, which receives higher amounts of precipitation and supports a diverse amount of leguminous trees, perennial shrubs and cacti. Records of precipitation and temperature data during the study at nearby weather stations previously installed were obtained. Total precipitation at the urban site and the desert site were 24.10 cm and 33.53 cm respectively for the study period (July 1, 2004 to June 30, 2005). Monthly precipitation levels were similar with higher levels of rainfall at the desert site during the months of July through October of 2004, December 2004 through March 2005, April, and June of 2005. Monthly precipitation levels were higher at the urban site during the months of November and March. There were no recorded levels of precipitation at either site during the months of June of 2004 and May of 2005. Mean daily temperatures at both sites were similar with higher temperatures at the desert site during the months of October through December and higher temperature at the urban site during the months of February through June 2005. During the months that growth was measured (February through June 2005), the mean weekly high and low temperatures were variable within a few degrees with the urban site usually warmer.

General soil analysis was performed using a subsample from a mixture of six randomly collected soil samples from each site (IAS Laboratories Phoenix, Arizona). Soil from the urban site and the desert site were classified as a sandy loam. Soil pH at the urban site and the desert site was 8.3 and 7.5 respectively. Sand, silt and clay was 68%, 24% and 8% at the urban site and 66%, 25%, and 9% at the desert site. Total phosphorus, total carbon and total nitrogen were 640 ppm, 3800 ppm; and 250 ppm at the urban site and 960 ppm, 15000 ppm, and 770 ppm at the desert site.

Study plant and Benomyl treatment

Data were collected from Encelia farinosa, a perennial shrub found growing throughout the Sonoran and Mojave Deserts as well as cultivated for planting as a landscape plant throughout the Phoenix metropolitan area. It is a drought deciduous plant that can have glaborous winter leaves that are dropped in response to heat and drought stress. Summer leaves are smaller and highly pubescent. E. farinosa plants located at the urban site were nursery grown plants transplanted from 3.8-liter containers in April 2004. E. farinosa plants located at the desert site were randomly selected from within the existing plant community. Fourteen E. farinosa plants were selected at each site for a total of twenty-eight plants sampled for this study.

A benomyl treatment (Benlate SP, E.I. du Pont de Nemours and Company, Agricultural Products, Wilmington, DE) (.24 grams of benomyl/Liter of water) was applied to half of the plants at each site using the method described by Dhillion and Gardsjord (2004). From July 2004 to May 1, 2005, two liters of benomyl solution was applied to these plants every five weeks with one liter of solution applied to the above ground foliar and stem tissue and one liter applied as a drench to the soil area under the shrub canopy. Soil was not evaluated for the depth of moisture penetration.

Plant responses and measurements

During February 2005, six months after the beginning of benomyl application, plants were pruned to a uniform cube with a height and width of 80 cm. Plant height and width measurement data were collected prior to pruning. Ten random leaves were collected from intersection points formed from an imaginary 3x3 grid placed over the top of the plant, with one additional leaf collected from the center of the plant and placed in self-locking plastic bags in October 2004, December 2004, February 2005 and June 2005. The areas of the collected leaves were measured using a CID inc. CI-203 Laser Area Meter with conveyor attachment (Vancouver, Washington, USA).

Several plant productivity measurements were taken during mid June 2005 at the end of the spring growing season. The number of flower clusters and seed heads, when present, were collected, counted, dried, and weighed to calculate reproductive effort (Koide 1991). Seeds were cleaned by first passing through a column air blower followed by tossing and trapping the seeds in a 1.40 mm sieve (USA Standard Sieve Series Sieve No. 14, Newark, NJ). Measurements were taken of plant height and two perpendicular widths. Measurements of two perpendicular widths were used to calculate canopy diameter (Housman et al. 2002), height and two widths were used to calculate growth index (Martin and Ruter 1996). Plants were then clipped back to their starting volume. The plant tissue removed from each plant was bagged individually, dried for 86 hours at 70º C (Koide 1985) and weighed to determine biomass accumulation during the growing season. Vegetative and reproductive biomass was used to determine sexual reproductive effort (SRE) (Werk and Ehleringer 1983; Wilson and Hartnett 1997).

Soil water content was determined in the rhizosphere of each plant (Brady and Weil 2002). Twenty-eight soil samples were collected August 2004, October 2004, January 2005 and July 2005 from a depth of 10 cm under the canopy of each study plant and were stored in self-locking plastic bags. Soil fresh weight and soil dry weight (oven dried at 104º C for 2 days) was ascertained from a 25-cm3-sub sample from each soil sample.

Determination of root colonization

Twenty-eight soil samples containing E. farinosa roots were collected for analysis of colonization by AM fungi and dark septate endophytes (DSE) in April of 2005, eight months after benomyl application began. Soil and root samples were collected from beneath the canopy of each plant to a depth of 15-20 cm. Fresh roots were separated from soil and fixed in 50% ethanol, cleared of cytoplasm and stained with trypan blue (Koske and Gemma 1989) and Sudan IV stain (Barrow and Aaltonen 2001). Percent colonization by AM and DSE fungi was ascertained using the modified intercept method (McGonigle et al. 1990).



Entities:

Table: 114_colonization_1.csv[download]

Description:degree of mycorrhiza colonization of roots


Attribute:sample_id
 Description:Unique number identifying the sample

Attribute:site_id
 Description:Identification of the sites sampled during this study.

Attribute:exclusion_id
 Description:This identifies whether the data has been excluded (EY) or not (EN).
Domain:Enumeration:
EN: no exclusion
EY: exclusion

Attribute:water_id
 Description:This describes the watering of the sample plant as not watered (WN) or watered (WY).
Domain:Enumeration:
WN: no additional water
wY: additional water

Attribute:benomyl_id
 Description:This indecates whether benomyl fungicide was used (BY) or not (BN).
Domain:Enumeration:
BN: no Benomyl
BY: Benomyl treated

Attribute:plant_id
 Description:Identifies each sampled plant.

Attribute:zero_hits
 Description:count of root segments without trace of mycorrhiza
Measurement Unit:dimensionless

Attribute:hyphae_perc
 Description:Percent of root segments with hyphae found.
Measurement Unit:dimensionless

Attribute:vesicle_perc
 Description:Percent of root segments with vesicles found.
Measurement Unit:dimensionless

Attribute:arbuscules_perc
 Description:Percent of root segments with arbuscules found.
Measurement Unit:dimensionless

Attribute:coil_perc
 Description:Percent of root segments with coil found
Measurement Unit:dimensionless

Attribute:num_root_segments
 Description:Number of tested root segments.
Measurement Unit:dimensionless

Attribute:dse_perc
 Description:Percent of DSE
Measurement Unit:dimensionless


Table: 114_dry_seeds_1.csv[download]

Description:dry mass of seeds produced


Attribute:sample_id
 Description:Unique numbers identifying the samples.

Attribute:site_id
 Description:Identification of the sites sampled during this study.

Attribute:exclusion_id
 Description:Identifies whether the sample has been excuded (EY) or not (EN).
Domain:Enumeration:
EN: no exclusion
EY: exclusion

Attribute:water_id
 Description:This describes the watering of the sample plant as not watered (WN) or watered (WY).
Domain:Enumeration:
WN: no additional water
wY: additional water

Attribute:benomyl_id
 Description:This indecates whether benomyl fungicide was used (BY) or not (BN).
Domain:Enumeration:
BN: no Benomyl
BY: Benomyl treated

Attribute:plant_id
 Description:Unique identification of the plants sampled in this study.

Attribute:seed_mass
 Description:Mass of the seeds per plant
Measurement Unit:gram


Table: 114_leaf_area_1.csv[download]

Description:leaf area measurements


Attribute:sample_id
 Description:Unique numbers identifying samples.

Attribute:site_id
 Description:Identification of the sites sampled during this study.

Attribute:exclusion_id
 Description:Indicates whether the sample has been excluded (EY) or not (EN).
Domain:Enumeration:
EN: no exclusion
EY: exclusion

Attribute:water_id
 Description:This describes the watering of the sample plant as not watered (WN) or watered (WY).
Domain:Enumeration:
WN: no additional water
wY: additional water

Attribute:benomyl_id
 Description:This indecates whether benomyl fungicide was used (BY) or not (BN).
Domain:Enumeration:
BN: no Benomyl
BY: Benomyl treated

Attribute:plant_id
 Description:Identification of the sampled plants.

Attribute:leaf_id
 Description:Identification of the leaves measured on the sampled plant.

Attribute:aug_04_leaf_area
 Description:Leaf area measured in August of 2004
Measurement Unit:squareCentimeters

Attribute:oct_04_leaf_area
 Description:Leaf area measured in October of 2004.
Measurement Unit:squareCentimeters

Attribute:feb_05_leaf_area
 Description:Leaf area measured in February of 2005.
Measurement Unit:squareCentimeters

Attribute:apr_05_leaf_area
 Description:Leaf area measured in April of 2005.
Measurement Unit:squareCentimeters

Attribute:jun_05_leaf_area
 Description:Leaf area measured in June of 2005.
Measurement Unit:squareCentimeters


Table: 114_plant_growth_1.csv[download]

Description:Plant growth measurements


Attribute:sample_id
 Description:Unique identification numbers of the samples taken.

Attribute:site_id
 Description:Identification of the sites sampled during this study.

Attribute:exclusion_id
 Description:Indecates whether the sample has been excluded (EY) or not (EN).
Domain:Enumeration:
EN: no exclusion
EY: exclusion

Attribute:water_id
 Description:This describes the watering of the sample plant as not watered (WN) or watered (WY).
Domain:Enumeration:
WN: no additional water
wY: additional water

Attribute:benomyl_id
 Description:This indecates whether benomyl fungicide was used (BY) or not (BN).
Domain:Enumeration:
BN: no Benomyl
BY: Benomyl treated

Attribute:plant_id
 Description:Unique plant identification.

Attribute:jul_04_height
 Description:Measured height in July of 2004
Measurement Unit:centimeter

Attribute:jul_04_width
 Description:Measured width in July of 2004
Measurement Unit:centimeter

Attribute:oct_04_height
 Description:Measured height in October of 2004
Measurement Unit:centimeter

Attribute:oct_04_width
 Description:Measured width in October of 2004
Measurement Unit:centimeter

Attribute:feb_05_clipp_height
 Description:Measured height in February of 2005 after clipping
Measurement Unit:centimeter

Attribute:feb_05_clipp_width_ns
 Description:Measured width in February of 2005 after clipping, running north to south
Measurement Unit:centimeter

Attribute:feb_05_clipp_width_ew
 Description:Measured width in February of 2005 after clipping, running east to west
Measurement Unit:centimeter

Attribute:apr_05_height
 Description:Measured height in April of 2005
Measurement Unit:centimeter

Attribute:apr_05_width_ns
 Description:Measured width in April of 2005 running north to south
Measurement Unit:centimeter

Attribute:apr_05_height_ew
 Description:Measured width in April of 2005 running east to west
Measurement Unit:centimeter

Attribute:jun_05_height
 Description:Measured height in June of 2005
Measurement Unit:centimeter

Attribute:jun_05_width_ns
 Description:Measured width in June of 2005 running north to south
Measurement Unit:centimeter

Attribute:jun_05_width_ew
 Description:Measured width in June of 2005 running east to west
Measurement Unit:centimeter

Attribute:aboce_dm
 Description:dry mass of aboce
Measurement Unit:gram

Attribute:seed_dm
 Description:Dry mass of seeds
Measurement Unit:gram

Attribute:flower_dm
 Description:Dry mass of the flowers
Measurement Unit:gram

Attribute:total_dm
 Description:Total dry mass
Measurement Unit:gram

Attribute:num_flowers
 Description:Number of flowers present on the plant.
Measurement Unit:number


Table: 114_sites_1.csv[download]

Description:site descriptions


Attribute:site_id
 Description:Identification of the sites sampled during this study.

Attribute:site_name
 Description:Name of the sampled site.


Table: 114_soil_moisture_1.csv[download]

Description:soil moisture measurements


Attribute:sample_id
 Description:Unique identification number for each sample taken.

Attribute:site_id
 Description:Identification of the sites sampled during this study.

Attribute:plot_id
 Description:Identification for plots within each site.

Attribute:plant_id
 Description:Identification for the plants sampled in each site

Attribute:water_id
 Description:Indecates whether the sampled plant has been watered (WY) or not (WN).
Domain:Enumeration:
WN: no additional water
wY: additional water

Attribute:benomyl_id
 Description:This indecates whether benomyl fungicide was used (BY) or not (BN).
Domain:Enumeration:
BN: no Benomyl
BY: Benomyl treated

Attribute:aug_04_loss
 Description:Percent of soil water measured in August 2004 (g water / g dry soil).

Attribute:oct_04_loss
 Description:Percent of soil water measured in October 2004 (g water / g dry soil).
Measurement Unit:dimensionless

Attribute:feb_05_loss
 Description:Percent of soil water measured in February 2005 (g water / g dry soil).
Measurement Unit:dimensionless

Attribute:jul_05_loss
 Description:Percent of soil watar measured in July 2005 (g water / g dry soil).
Measurement Unit:dimensionless


This material is based upon work supported by the National Science Foundation under grant nos. BCS-1026865, DEB-0423704 and DEB-9714833.